uniprot mcp server for Gemini CLI

io.github.cyanheads/uniprot-mcp-server

Protein research over UniProtKB: search by function, fetch curated records, map IDs, proteomes.

client:Gemini CLI transport:streamable-http runtime:npm tools:6

Install uniprot mcp server in Gemini CLI

~/.gemini/settings.json · windows: %USERPROFILE%\.gemini\settings.json

{
  "mcpServers": {
    "uniprot-mcp-server": {
      "httpUrl": "https://uniprot.caseyjhand.com/mcp"
    }
  }
}

Gemini expands $VAR and ${VAR} inside env values, so a secret can live in your shell rather than this file. Gemini CLI docs