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mcp/harbor
Gemini CLI

methods-mcp for Gemini CLI

io.github.flynnlachendro/methods-mcp

MCP server for structured methods extraction + reproducibility heuristics on academic papers.

client:Gemini CLI transport:stdio runtime:pypi

Install methods-mcp in Gemini CLI

~/.gemini/settings.json · windows: %USERPROFILE%\.gemini\settings.json

Held in this page only — never stored, logged, or sent anywhere but back to your screen. 

{
  "mcpServers": {
    "methods-mcp": {
      "command": "uvx",
      "args": [
        "methods-mcp"
      ],
      "env": {
        "ANTHROPIC_API_KEY": "<ANTHROPIC_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>",
        "METHODS_MCP_MODEL": "<METHODS_MCP_MODEL>"
      }
    }
  }
}

Gemini expands $VAR and ${VAR} inside env values, so a secret can live in your shell rather than this file. Gemini CLI docs

methods-mcp in other clients

methods-mcp MCP server