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LangChain

PhysiCell Configuration Builder for LangChain

io.github.marcorusc/physicell

MCP server for building, inspecting, and exporting PhysiCell and PhysiBoSS configuration files

client:LangChain transport:stdio runtime:pypi

Install PhysiCell Configuration Builder in LangChain

pip install langchain-mcp-adapters

from langchain_mcp_adapters.client import MultiServerMCPClient

client = MultiServerMCPClient({
        "physicell": {
            "transport": "stdio",
            "command": "uvx",
            "args": ["mcp-biomodelling-servers"],
        }
})

tools = await client.get_tools()

get_tools() returns the server's tools as LangChain tools, ready for an agent. LangChain docs

PhysiCell Configuration Builder in other clients