hyphy mcp for Zed

io.github.mrfentmen/hyphy-mcp

HyPhy MCP: 20 real tools to read, check, lint, scaffold, build and run HyPhy code.

client:Zed transport:stdio runtime:npm

Install hyphy mcp in Zed

~/.config/zed/settings.json · windows: %APPDATA%\Zed\settings.json

{
  "context_servers": {
    "hyphy-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/hyphy-mcp"
      ]
    }
  }
}

Merge this into your existing settings object — do not replace the file. Zed docs