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mcp/harbor
Gemini CLI

ncbi datasets mcp for Gemini CLI

io.github.mrfentmen/ncbi-datasets-mcp

NCBI Datasets: genome assemblies by taxon, gene records by symbol and taxonomy lookups

client:Gemini CLI transport:stdio runtime:npm

Install ncbi datasets mcp in Gemini CLI

~/.gemini/settings.json · windows: %USERPROFILE%\.gemini\settings.json 

{
  "mcpServers": {
    "ncbi-datasets-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Gemini expands $VAR and ${VAR} inside env values, so a secret can live in your shell rather than this file. Gemini CLI docs

ncbi datasets mcp in other clients

ncbi datasets mcp MCP server