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snakemake mcp for Grok

io.github.mrfentmen/snakemake-mcp

Snakemake MCP: 20 real tools to read, check, lint, scaffold, build and run Snakemake code.

client:Grok transport:stdio runtime:npm

Install snakemake mcp in Grok

.mcp.json (in your project root)

{
  "mcpServers": {
    "snakemake-mcp": {
      "type": "stdio",
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/snakemake-mcp"
      ]
    }
  }
}

Grok Build reads Claude Code's .mcp.json and Claude Desktop's config unchanged, so a server you have already set up there needs nothing new. The Grok web app and X integration do not take custom servers. Grok docs

snakemake mcp in other clients