ChatSpatial for Zed

io.github.cafferychen777/chatspatial

Schema-enforced spatial transcriptomics analysis with 20 tools and 66 methods via MCP

client:Zed transport:stdio runtime:pypi

Install ChatSpatial in Zed

~/.config/zed/settings.json · windows: %APPDATA%\Zed\settings.json

{
  "context_servers": {
    "chatspatial": {
      "command": "uvx",
      "args": [
        "chatspatial"
      ]
    }
  }
}

Merge this into your existing settings object — do not replace the file. Zed docs