AMR (antimicrobial resistance) for VS Code
io.github.pabloestepaa/amr-mcp
Antimicrobial resistance genes, sequences and literature from NCBI and UniProt
client:VS Code
transport:stdio
runtime:pypi
Install AMR (antimicrobial resistance) in VS Code
.vscode/mcp.json
{
"inputs": [
{
"type": "promptString",
"id": "ncbi-api-key",
"description": "NCBI_API_KEY",
"password": true
},
{
"type": "promptString",
"id": "ncbi-email",
"description": "NCBI_EMAIL",
"password": true
}
],
"servers": {
"amr-mcp": {
"type": "stdio",
"command": "uvx",
"args": [
"amr-mcp"
],
"env": {
"NCBI_API_KEY": "${input:ncbi-api-key}",
"NCBI_EMAIL": "${input:ncbi-email}"
}
}
}
}VS Code prompts for each input the first time the server starts, so no secret is written to the file. VS Code docs