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mcp/harbor
Gemini CLI

Ncbi Datasets for Gemini CLI

io.github.pipeworx-io/ncbi-datasets

NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…

client:Gemini CLI transport:streamable-http tools:39

Install Ncbi Datasets in Gemini CLI

~/.gemini/settings.json · windows: %USERPROFILE%\.gemini\settings.json 

{
  "mcpServers": {
    "ncbi-datasets": {
      "httpUrl": "https://gateway.pipeworx.io/ncbi-datasets/mcp"
    }
  }
}

Gemini expands $VAR and ${VAR} inside env values, so a secret can live in your shell rather than this file. Gemini CLI docs

What Gemini CLI can do once it is connected

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