deep_research — Ncbi Datasets MCP Tool

• Claude Code Ncbi Datasets deep_research run in your project directory
• Claude Desktop Ncbi Datasets deep_research ~/Library/Application Support/Claude/claude_desktop_config.json
• Cursor Ncbi Datasets deep_research ~/.cursor/mcp.json
• VS Code Ncbi Datasets deep_research .vscode/mcp.json
• Zed Ncbi Datasets deep_research ~/.config/zed/settings.json
• Windsurf Ncbi Datasets deep_research ~/.codeium/windsurf/mcp_config.json
• Cline Ncbi Datasets deep_research ~/Library/Application Support/Code/User/globalStorage/saoudrizwan.claude-dev/settings/cline_mcp_settings.json
• Gemini CLI Ncbi Datasets deep_research ~/.gemini/settings.json
• Grok Ncbi Datasets deep_research .mcp.json (in your project root)
• ChatGPT Ncbi Datasets deep_research Settings → Connectors → Advanced → Developer mode
• Claude.ai Ncbi Datasets deep_research Settings → Connectors → Add custom connector
• LangChain Ncbi Datasets deep_research pip install langchain-mcp-adapters

Fastest route

claude mcp add --transport http ncbi-datasets https://gateway.pipeworx.io/ncbi-datasets/mcp

Other tools on this server

• ask_pipeworx
• ask_pipeworx_beta
• ask_pipeworx_grounded
• search_within
• discover_tools
• resolve_entity
• compare_entities
• subscribe
• unsubscribe
• list_subscriptions
• recent_alerts
• entity_profile
• recent_changes
• validate_claim
• company_facts
• scan_dependency
• bet_research
• polymarket_arbitrage
• polymarket_edges
• polymarket_kalshi_spread
• polymarket_fill_risk
• polymarket_edge_tracker
• kalshi_weather_edge
• resolution_audit
• resolution_diff
• release_calendar_markets
• pipeworx_trending
• suggest_questions
• generate_llms_txt
• ai_visibility_check
• scan_competitor_ai_presence
• pipeworx_feedback
• remember
• recall
• forget
• ncbi_genome_reports
• ncbi_gene_by_symbol
• ncbi_taxonomy