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mcp/harbor
LangChain

BioMCP for LangChain

io.github.gucci10248/biomcp

50+ biomedical data sources in one MCP server — PubMed, ClinVar, gnomAD, KEGG, and more

client:LangChain transport:stdio runtime:oci

Install BioMCP in LangChain

pip install langchain-mcp-adapters 

from langchain_mcp_adapters.client import MultiServerMCPClient

client = MultiServerMCPClient({
        "biomcp": {
            "transport": "stdio",
            "command": "docker",
            "args": ["run", "-i", "--rm", "docker.io/jackgucci/biomcp:0.8.22"],
        }
})

tools = await client.get_tools()

get_tools() returns the server's tools as LangChain tools, ready for an agent. LangChain docs

BioMCP in other clients

BioMCP MCP server