biopax mcp for Claude Code

io.github.mrfentmen/biopax-mcp

BioPAX MCP: parse RDF models, validate objects, IDs and pathway classes.

client:Claude Code transport:stdio runtime:npm

Install biopax mcp in Claude Code

run in your project directory

claude mcp add biopax-mcp -- npx -y @mrfentmen/biopax-mcp

Adds it for this project only. Append --scope user to make it available everywhere. Claude Code docs