biopax mcp for Zed
io.github.mrfentmen/biopax-mcp
BioPAX MCP: parse RDF models, validate objects, IDs and pathway classes.
client:Zed
transport:stdio
runtime:npm
Install biopax mcp in Zed
~/.config/zed/settings.json · windows: %APPDATA%\Zed\settings.json
{
"context_servers": {
"biopax-mcp": {
"command": "npx",
"args": [
"-y",
"@mrfentmen/biopax-mcp"
]
}
}
}Merge this into your existing settings object — do not replace the file. Zed docs