base_editing_design — workbench MCP Tool
base_editing_design
(base editing design) is one of 144 tools on the
workbench
MCP server. Connect the server and your client discovers it on the handshake.
by client
How to call base_editing_design from your client
- Claude Code workbench base_editing_design run in your project directory
- Claude Desktop workbench base_editing_design ~/Library/Application Support/Claude/claude_desktop_config.json
- Cursor workbench base_editing_design ~/.cursor/mcp.json
- VS Code workbench base_editing_design .vscode/mcp.json
- Zed workbench base_editing_design ~/.config/zed/settings.json
- Windsurf workbench base_editing_design ~/.codeium/windsurf/mcp_config.json
- Cline workbench base_editing_design ~/Library/Application Support/Code/User/globalStorage/saoudrizwan.claude-dev/settings/cline_mcp_settings.json
- Gemini CLI workbench base_editing_design ~/.gemini/settings.json
- Grok workbench base_editing_design .mcp.json (in your project root)
- ChatGPT workbench base_editing_design Settings → Connectors → Advanced → Developer mode
- Claude.ai workbench base_editing_design Settings → Connectors → Add custom connector
- LangChain workbench base_editing_design pip install langchain-mcp-adapters
Fastest route
claude mcp add --transport http workbench https://seqbench.com/api/mcpOther tools on this server
- reverse_complement
- gc_content
- translate
- find_orfs
- format_sequence
- motif_finder
- reverse_translate
- random_sequence
- melting_temperature
- annealing_temperature
- oligo_analysis
- in_silico_pcr
- primer_design
- dna_molarity
- site_directed_mutagenesis
- oligo_pool_screen
- cross_dimer
- primer_specificity
- oligo_cofold
- barcode_design
- barcode_audit
- restriction_sites
- double_digest
- cloning_simulate
- plasmid_annotate
- construct_qc
- construct_autofix
- virtual_gel
- ligation_setup
- gel_band_size
- golden_gate_from_parts
- assembly_outcomes
- diagnostic_digest
- repeat_instability
- nonrepetitive_parts_find
- nonrepetitive_parts_design
- operon_scan
- operon_design
- synthesis_complexity
- band_traceback
- sanger_indel_spectrum
- outcome_deconvolve
- trace_secondary_peaks
- trace_diagnose
- primer_site_accessibility
- promoter_predict
- promoter_library_design
- cloning_next_observation
- read_placement_plan
- base_edit_quant
- sanger_knockin_quant
- editing_plate_quantify
- multiplex_panel_design
- cloning_diagnose
- protein_properties
- protein_hydrophobicity
- protease_digestion
- codon_optimize
- codon_adaptation_index
- pairwise_alignment
- multiple_sequence_alignment
- variant_comparator
- dot_plot
- identity_matrix
- sanger_plate_verify
- crispr_grna_design
- crispr_offtarget_check
- crispr_hdr_donor
- crispr_ontarget
- elsa_capacity
- elsa_design
- parse_genbank
- sequence_format_convert
- seqfile_stats
- parse_sanger_trace
- sanger_vs_reference
- parse_snapgene
- sanger_assemble
- characterize_sequence
- sequence_report
- cpg_islands
- parse_gff3
- blast_submit
- blast_poll
- od600_cells
- qpcr_ddct
- centrifuge_conversion
- solution_prep
- session_create
- session_get
- session_set
- session_run
- sequence_fetch
- sequence_search
- protein_annotate_submit
- protein_annotate_poll
- plasmid_identify
- plasmid_full_report
- plasmid_dossier
- plasmid_deep_annotate
- verify_construct
- verify_assembly
- golden_gate_fidelity
- golden_gate_design
- save_permalink
- sequencing_readback_verify
- whole_plasmid_verify
- web_search
- id_map_submit
- id_map_poll
- ortholog_map
- volcano_plot_data
- expression_heatmap_cluster
- functional_enrichment
- hgvs_convert
- fastq_qc_report
- fastq_trim
- alphafold_lookup
- export_plate_layout
- export_opentrons_protocol
- export_echo_picklist
- variant_annotate
- variant_to_construct
- gene_model
- gene_dossier
- gene_expression
- prime_editing_design
- prime_editing_twin_design
- prime_editing_efficiency
- sirna_design
- aso_design
- kasp_primer_design
- rna_fold
- rbs_predict
- rbs_design
- rbs_library_design
- rbs_occlusion
- riboswitch_states
- vector_library_search
- vector_library_get
- parts_library_search
- batch
- workflow
This list was read from the server itself, by connecting to it and calling tools/list on 24 September 2026. It is what
the server actually exposes, not what its listing claims.
Mutating and Read-only are read off each tool's name, not its schema — a hint, not a guarantee. The registry stores tool names only; connect the server for its live schemas.